HL_6HCJ_120
3D structure
- PDB id
- 6HCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CCGCUGAAUUUAAGCAUAUUAGUCAGCGG
- Length
- 29 nucleotides
- Bulged bases
- 6HCJ|1|51|A|39, 6HCJ|1|51|A|42
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HCJ|1|51|C|27
6HCJ|1|51|C|28
6HCJ|1|51|G|29
6HCJ|1|51|C|30
6HCJ|1|51|U|31
6HCJ|1|51|G|32
6HCJ|1|51|A|33
6HCJ|1|51|A|34
6HCJ|1|51|U|35
6HCJ|1|51|U|36
6HCJ|1|51|U|37
6HCJ|1|51|A|38
6HCJ|1|51|A|39
6HCJ|1|51|G|40
6HCJ|1|51|C|41
6HCJ|1|51|A|42
6HCJ|1|51|U|43
6HCJ|1|51|A|44
6HCJ|1|51|U|45
6HCJ|1|51|U|46
6HCJ|1|51|A|47
6HCJ|1|51|G|48
6HCJ|1|51|U|49
6HCJ|1|51|C|50
6HCJ|1|51|A|51
6HCJ|1|51|G|52
6HCJ|1|51|C|53
6HCJ|1|51|G|54
6HCJ|1|51|G|55
Current chains
- Chain 51
- 28S ribosomal RNA
Nearby chains
- Chain L3
- eL13
- Chain N3
- Ribosomal protein L15
- Chain a3
- uL15
- Chain j3
- Ribosomal protein L37
- Chain o3
- eL42
Coloring options: