HL_6HCJ_127
3D structure
- PDB id
- 6HCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CGGGGGCUACGAAAGCCGCCGUG
- Length
- 23 nucleotides
- Bulged bases
- 6HCJ|1|51|G|1359, 6HCJ|1|51|A|1371, 6HCJ|1|51|C|1378
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HCJ|1|51|C|1357
6HCJ|1|51|G|1358
6HCJ|1|51|G|1359
6HCJ|1|51|G|1360
6HCJ|1|51|G|1361
6HCJ|1|51|G|1362
6HCJ|1|51|C|1363
6HCJ|1|51|U|1364
6HCJ|1|51|A|1368
6HCJ|1|51|C|1369
6HCJ|1|51|G|1370
6HCJ|1|51|A|1371
6HCJ|1|51|A|1372
6HCJ|1|51|A|1373
6HCJ|1|51|G|1374
6HCJ|1|51|C|1375
6HCJ|1|51|C|1376
6HCJ|1|51|G|1377
6HCJ|1|51|C|1378
6HCJ|1|51|C|1379
6HCJ|1|51|G|1380
6HCJ|1|51|U|1381
6HCJ|1|51|G|1382
Current chains
- Chain 51
- 28S ribosomal RNA
Nearby chains
- Chain 81
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain C3
- uL4
- Chain L3
- eL13
- Chain N3
- Ribosomal protein L15
- Chain Y3
- Ribosomal protein L26
- Chain a3
- uL15
Coloring options: