HL_6HCJ_136
3D structure
- PDB id
- 6HCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CCAAGGGAACGGGCUUGG
- Length
- 18 nucleotides
- Bulged bases
- 6HCJ|1|51|A|3876, 6HCJ|1|51|A|3877, 6HCJ|1|51|C|3878
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HCJ|1|51|C|3869
6HCJ|1|51|C|3870
6HCJ|1|51|A|3871
6HCJ|1|51|A|3872
6HCJ|1|51|G|3873
6HCJ|1|51|G|3874
6HCJ|1|51|G|3875
6HCJ|1|51|A|3876
6HCJ|1|51|A|3877
6HCJ|1|51|C|3878
6HCJ|1|51|G|3879
6HCJ|1|51|G|3880
6HCJ|1|51|G|3881
6HCJ|1|51|C|3882
6HCJ|1|51|U|3883
6HCJ|1|51|U|3884
6HCJ|1|51|G|3885
6HCJ|1|51|G|3886
Current chains
- Chain 51
- 28S ribosomal RNA
Nearby chains
- Chain B3
- uL3
- Chain O3
- uL13
- Chain e3
- eL32
- Chain f3
- eL33
Coloring options: