HL_6HCJ_152
3D structure
- PDB id
- 6HCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CGAAGACGAUCAGAUACCGUCGUAG
- Length
- 25 nucleotides
- Bulged bases
- 6HCJ|1|A2|U|1061
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HCJ|1|A2|C|1047
6HCJ|1|A2|G|1048
6HCJ|1|A2|A|1049
6HCJ|1|A2|A|1050
6HCJ|1|A2|G|1051
6HCJ|1|A2|A|1052
6HCJ|1|A2|C|1053
6HCJ|1|A2|G|1054
6HCJ|1|A2|A|1055
6HCJ|1|A2|U|1056
6HCJ|1|A2|C|1057
6HCJ|1|A2|A|1058
6HCJ|1|A2|G|1059
6HCJ|1|A2|A|1060
6HCJ|1|A2|U|1061
6HCJ|1|A2|A|1062
6HCJ|1|A2|C|1063
6HCJ|1|A2|C|1064
6HCJ|1|A2|G|1065
6HCJ|1|A2|U|1066
6HCJ|1|A2|C|1067
6HCJ|1|A2|G|1068
6HCJ|1|A2|U|1069
6HCJ|1|A2|A|1070
6HCJ|1|A2|G|1071
Current chains
- Chain A2
- 18S ribosomal RNA
Nearby chains
- Chain 33
- Transfer RNA; tRNA
- Chain 51
- Large subunit ribosomal RNA; LSU rRNA
- Chain A3
- Ribosomal protein L8
- Chain P2
- uS11
- Chain b2
- eS26
- Chain v3
- mRNA
Coloring options: