HL_6HCM_005

3D structure

PDB id

6HCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (stalled monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

UAACCA

Length

6 nucleotides

Bulged bases

6HCM|1|52|C|72

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6HCM_005 not in the Motif Atlas

Homologous match to HL_5TBW_002

Geometric discrepancy: 0.2318

The information below is about HL_5TBW_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_22523.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

13

Unit IDs

6HCM|1|52|U|68
6HCM|1|52|A|69
6HCM|1|52|A|70
6HCM|1|52|C|71
6HCM|1|52|C|72
6HCM|1|52|A|73

Current chains

Chain 52

28S ribosomal RNA

Nearby chains

Chain L3

eL13

Chain N3

Ribosomal protein L15

Chain a3

uL15

Chain i3

60S ribosomal protein L36