HL_6HCM_007
3D structure
- PDB id
- 6HCM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit collided di-ribosome (stalled monosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.8 Å
Loop
- Sequence
- CGCGGCG
- Length
- 7 nucleotides
- Bulged bases
- 6HCM|1|52|G|134, 6HCM|1|52|G|135
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6HCM_007 not in the Motif Atlas
- Geometric match to HL_5J7L_143
- Geometric discrepancy: 0.1797
- The information below is about HL_5J7L_143
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.5
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 19
Unit IDs
6HCM|1|52|C|131
6HCM|1|52|G|132
6HCM|1|52|C|133
6HCM|1|52|G|134
6HCM|1|52|G|135
6HCM|1|52|C|136
6HCM|1|52|G|137
Current chains
- Chain 52
- 28S ribosomal RNA
Nearby chains
- Chain 82
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain N3
- Ribosomal protein L15
- Chain h3
- uL29
- Chain j3
- Ribosomal protein L37
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