HL_6HCM_015

3D structure

PDB id

6HCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (stalled monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

CCGCUCCCGUCGGCGG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCM|1|52|C|516
6HCM|1|52|C|517
6HCM|1|52|G|518
6HCM|1|52|C|519
6HCM|1|52|U|520
6HCM|1|52|C|521
6HCM|1|52|C|522
6HCM|1|52|C|523
6HCM|1|52|G|638
6HCM|1|52|U|639
6HCM|1|52|C|640
6HCM|1|52|G|641
6HCM|1|52|G|642
6HCM|1|52|C|643
6HCM|1|52|G|644
6HCM|1|52|G|645

Current chains

Chain 52

28S ribosomal RNA

Nearby chains

Chain L3

eL13