HL_6HCM_020

3D structure

PDB id

6HCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (stalled monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

GCUACGAAAGC

Length

11 nucleotides

Bulged bases

6HCM|1|52|A|1371

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCM|1|52|G|1362
6HCM|1|52|C|1363
6HCM|1|52|U|1364
6HCM|1|52|A|1368
6HCM|1|52|C|1369
6HCM|1|52|G|1370
6HCM|1|52|A|1371
6HCM|1|52|A|1372
6HCM|1|52|A|1373
6HCM|1|52|G|1374
6HCM|1|52|C|1375

Current chains

Chain 52

28S ribosomal RNA

Nearby chains

Chain 82

5.8S ribosomal RNA; 5.8S rRNA

Chain C3

uL4

Chain L3

eL13

Chain N3

Ribosomal protein L15

Chain Y3

Ribosomal protein L26