HL_6HCM_040

3D structure

PDB id

6HCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (stalled monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

CGAUGGCCUCCGUUG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCM|1|52|C|2482
6HCM|1|52|G|2483
6HCM|1|52|A|2484
6HCM|1|52|U|2485
6HCM|1|52|G|2486
6HCM|1|52|G|2487
6HCM|1|52|C|2488
6HCM|1|52|C|2489
6HCM|1|52|U|2490
6HCM|1|52|C|2491
6HCM|1|52|C|2492
6HCM|1|52|G|2493
6HCM|1|52|U|2494
6HCM|1|52|U|2495
6HCM|1|52|G|2496

Current chains

Chain 52

28S ribosomal RNA

Nearby chains

Chain 82

5.8S ribosomal RNA; 5.8S rRNA

Chain X3

uL23