HL_6HCM_058

3D structure

PDB id

6HCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (stalled monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

AGGGAACGGGCU

Length

12 nucleotides

Bulged bases

6HCM|1|52|A|3876, 6HCM|1|52|A|3877, 6HCM|1|52|C|3878

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCM|1|52|A|3872
6HCM|1|52|G|3873
6HCM|1|52|G|3874
6HCM|1|52|G|3875
6HCM|1|52|A|3876
6HCM|1|52|A|3877
6HCM|1|52|C|3878
6HCM|1|52|G|3879
6HCM|1|52|G|3880
6HCM|1|52|G|3881
6HCM|1|52|C|3882
6HCM|1|52|U|3883

Current chains

Chain 52

28S ribosomal RNA

Nearby chains

Chain B3

uL3

Chain O3

uL13

Chain e3

eL32

Chain f3

eL33