HL_6HCM_061

3D structure

PDB id

6HCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (stalled monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

UGUCAAACGGUAACGCA

Length

17 nucleotides

Bulged bases

6HCM|1|52|A|4214, 6HCM|1|52|C|4221

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCM|1|52|U|4208
6HCM|1|52|G|4209
6HCM|1|52|U|4210
6HCM|1|52|C|4211
6HCM|1|52|A|4212
6HCM|1|52|A|4213
6HCM|1|52|A|4214
6HCM|1|52|C|4215
6HCM|1|52|G|4216
6HCM|1|52|G|4217
6HCM|1|52|U|4218
6HCM|1|52|A|4219
6HCM|1|52|A|4220
6HCM|1|52|C|4221
6HCM|1|52|G|4222
6HCM|1|52|C|4223
6HCM|1|52|A|4224

Current chains

Chain 52

28S ribosomal RNA

Nearby chains

Chain I3

60S ribosomal protein L10

Chain T3

eL21

Chain b3

eL29