HL_6HCM_089

3D structure

PDB id

6HCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (stalled monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

GUCGCCGUGCC

Length

11 nucleotides

Bulged bases

6HCM|1|A1|G|385

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCM|1|A1|G|377
6HCM|1|A1|U|378
6HCM|1|A1|C|379
6HCM|1|A1|G|380
6HCM|1|A1|C|381
6HCM|1|A1|C|382
6HCM|1|A1|G|383
6HCM|1|A1|U|384
6HCM|1|A1|G|385
6HCM|1|A1|C|386
6HCM|1|A1|C|387

Current chains

Chain A1

18S ribosomal RNA

Nearby chains

Chain J1

eS8

Chain M1

Ribosomal protein S11