HL_6HCM_091

3D structure

PDB id

6HCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (stalled monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

AGCCUGAGAAACGGCU

Length

16 nucleotides

Bulged bases

6HCM|1|A1|A|448, 6HCM|1|A1|G|451

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCM|1|A1|A|439
6HCM|1|A1|G|440
6HCM|1|A1|C|441
6HCM|1|A1|C|442
6HCM|1|A1|U|443
6HCM|1|A1|G|444
6HCM|1|A1|A|445
6HCM|1|A1|G|446
6HCM|1|A1|A|447
6HCM|1|A1|A|448
6HCM|1|A1|A|449
6HCM|1|A1|C|450
6HCM|1|A1|G|451
6HCM|1|A1|G|452
6HCM|1|A1|C|453
6HCM|1|A1|U|454

Current chains

Chain A1

18S ribosomal RNA

Nearby chains

Chain F1

eS4

Chain H1

40S ribosomal protein S6

Chain J1

eS8

Chain Z1

eS24