HL_6HCM_109

3D structure

PDB id

6HCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (stalled monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

CGACCCCGGUCGG

Length

13 nucleotides

Bulged bases

6HCM|1|A1|G|1428

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCM|1|A1|C|1412
6HCM|1|A1|G|1413
6HCM|1|A1|A|1414
6HCM|1|A1|C|1415
6HCM|1|A1|C|1416
6HCM|1|A1|C|1417
6HCM|1|A1|C|1423
6HCM|1|A1|G|1424
6HCM|1|A1|G|1425
6HCM|1|A1|U|1426
6HCM|1|A1|C|1427
6HCM|1|A1|G|1428
6HCM|1|A1|G|1429

Current chains

Chain A1

18S ribosomal RNA

Nearby chains

Chain R1

Ribosomal protein S16

Chain U1

eS19