HL_6HCM_122

3D structure

PDB id

6HCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (stalled monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

CCUGACGUGCGAAUCGG

Length

17 nucleotides

Bulged bases

6HCM|1|52|U|1591, 6HCM|1|52|U|1596, 6HCM|1|52|A|1600, 6HCM|1|52|A|1601

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCM|1|52|C|1589
6HCM|1|52|C|1590
6HCM|1|52|U|1591
6HCM|1|52|G|1592
6HCM|1|52|A|1593
6HCM|1|52|C|1594
6HCM|1|52|G|1595
6HCM|1|52|U|1596
6HCM|1|52|G|1597
6HCM|1|52|C|1598
6HCM|1|52|G|1599
6HCM|1|52|A|1600
6HCM|1|52|A|1601
6HCM|1|52|U|1602
6HCM|1|52|C|1603
6HCM|1|52|G|1604
6HCM|1|52|G|1605

Current chains

Chain 52

28S ribosomal RNA

Nearby chains

Chain 1

nascent chain

Chain B3

uL3

Chain P3

uL22

Chain j3

Ribosomal protein L37