HL_6HCM_129

3D structure

PDB id

6HCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (stalled monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

GGGUUCAGAUCCCC

Length

14 nucleotides

Bulged bases

6HCM|1|52|U|2530, 6HCM|1|52|C|2531

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCM|1|52|G|2521
6HCM|1|52|G|2522
6HCM|1|52|G|2523
6HCM|1|52|U|2524
6HCM|1|52|U|2525
6HCM|1|52|C|2526
6HCM|1|52|A|2527
6HCM|1|52|G|2528
6HCM|1|52|A|2529
6HCM|1|52|U|2530
6HCM|1|52|C|2531
6HCM|1|52|C|2532
6HCM|1|52|C|2533
6HCM|1|52|C|2534

Current chains

Chain 52

28S ribosomal RNA

Nearby chains

Chain R3

eL19

Chain X3

uL23

Chain g3

eL34

Chain k3

eL38