HL_6HCM_141

3D structure

PDB id

6HCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (stalled monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

GACCUUUUGGGUUUUAAGC

Length

19 nucleotides

Bulged bases

6HCM|1|52|C|4349, 6HCM|1|52|U|4354

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCM|1|52|G|4347
6HCM|1|52|A|4348
6HCM|1|52|C|4349
6HCM|1|52|C|4350
6HCM|1|52|U|4351
6HCM|1|52|U|4352
6HCM|1|52|U|4353
6HCM|1|52|U|4354
6HCM|1|52|G|4355
6HCM|1|52|G|4356
6HCM|1|52|G|4357
6HCM|1|52|U|4358
6HCM|1|52|U|4359
6HCM|1|52|U|4360
6HCM|1|52|U|4361
6HCM|1|52|A|4362
6HCM|1|52|A|4363
6HCM|1|52|G|4364
6HCM|1|52|C|4365

Current chains

Chain 52

28S ribosomal RNA

Nearby chains

Chain L3

eL13

Chain Q3

eL18

Chain a3

uL15

Chain i3

60S ribosomal protein L36

Chain o3

eL42