HL_6HCM_147

3D structure

PDB id

6HCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (stalled monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

UUGGAUGGGAGACCGCCUG

Length

19 nucleotides

Bulged bases

6HCM|1|72|U|84

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCM|1|72|U|79
6HCM|1|72|U|80
6HCM|1|72|G|81
6HCM|1|72|G|82
6HCM|1|72|A|83
6HCM|1|72|U|84
6HCM|1|72|G|85
6HCM|1|72|G|86
6HCM|1|72|G|87
6HCM|1|72|A|88
6HCM|1|72|G|89
6HCM|1|72|A|90
6HCM|1|72|C|91
6HCM|1|72|C|92
6HCM|1|72|G|93
6HCM|1|72|C|94
6HCM|1|72|C|95
6HCM|1|72|U|96
6HCM|1|72|G|97

Current chains

Chain 72

5S ribosomal RNA

Nearby chains

Chain 52

Large subunit ribosomal RNA; LSU rRNA

Chain F3

uL30

Chain I3

60S ribosomal protein L10

Chain S3

eL20