HL_6HCM_154

3D structure

PDB id

6HCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (stalled monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

ACAGAUUGAUAGCUCUUU

Length

18 nucleotides

Bulged bases

6HCM|1|A1|U|1300

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCM|1|A1|A|1291
6HCM|1|A1|C|1292
6HCM|1|A1|A|1293
6HCM|1|A1|G|1294
6HCM|1|A1|A|1295
6HCM|1|A1|U|1296
6HCM|1|A1|U|1297
6HCM|1|A1|G|1298
6HCM|1|A1|A|1299
6HCM|1|A1|U|1300
6HCM|1|A1|A|1301
6HCM|1|A1|G|1302
6HCM|1|A1|C|1303
6HCM|1|A1|U|1304
6HCM|1|A1|C|1305
6HCM|1|A1|U|1306
6HCM|1|A1|U|1307
6HCM|1|A1|U|1308

Current chains

Chain A1

18S ribosomal RNA

Nearby chains

Chain Q1

uS19

Chain e1

uS14

Chain g1

Ribosomal protein S27a