HL_6HCM_156

3D structure

PDB id

6HCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (stalled monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

GAUUGCAAUUAUUC

Length

14 nucleotides

Bulged bases

6HCM|1|A1|U|1621, 6HCM|1|A1|U|1622, 6HCM|1|A1|A|1623

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCM|1|A1|G|1613
6HCM|1|A1|A|1614
6HCM|1|A1|U|1615
6HCM|1|A1|U|1616
6HCM|1|A1|G|1617
6HCM|1|A1|C|1618
6HCM|1|A1|A|1619
6HCM|1|A1|A|1620
6HCM|1|A1|U|1621
6HCM|1|A1|U|1622
6HCM|1|A1|A|1623
6HCM|1|A1|U|1624
6HCM|1|A1|U|1625
6HCM|1|A1|C|1626

Current chains

Chain A1

18S ribosomal RNA

Nearby chains

Chain Q1

uS19

Chain T1

uS13

Chain U1

eS19

Chain e1

uS14