HL_6HCM_164

3D structure

PDB id

6HCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (stalled monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

GGGCCGAAACGAUCU

Length

15 nucleotides

Bulged bases

6HCM|1|52|C|1768

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCM|1|52|G|1759
6HCM|1|52|G|1760
6HCM|1|52|G|1761
6HCM|1|52|C|1762
6HCM|1|52|C|1763
6HCM|1|52|G|1764
6HCM|1|52|A|1765
6HCM|1|52|A|1766
6HCM|1|52|A|1767
6HCM|1|52|C|1768
6HCM|1|52|G|1769
6HCM|1|52|A|1770
6HCM|1|52|U|1771
6HCM|1|52|C|1772
6HCM|1|52|U|1773

Current chains

Chain 52

28S ribosomal RNA

Nearby chains

Chain I3

60S ribosomal protein L10

Chain T1

uS13