HL_6HCQ_023

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

CGAGGCCUUCCAGUCCGCCGAG

Length

22 nucleotides

Bulged bases

6HCQ|1|51|C|1437, 6HCQ|1|51|U|1438, 6HCQ|1|51|C|1442

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|51|C|1431
6HCQ|1|51|G|1432
6HCQ|1|51|A|1433
6HCQ|1|51|G|1434
6HCQ|1|51|G|1435
6HCQ|1|51|C|1436
6HCQ|1|51|C|1437
6HCQ|1|51|U|1438
6HCQ|1|51|U|1440
6HCQ|1|51|C|1441
6HCQ|1|51|C|1442
6HCQ|1|51|A|1443
6HCQ|1|51|G|1444
6HCQ|1|51|U|1445
6HCQ|1|51|C|1446
6HCQ|1|51|C|1447
6HCQ|1|51|G|1448
6HCQ|1|51|C|1449
6HCQ|1|51|C|1450
6HCQ|1|51|G|1451
6HCQ|1|51|A|1452
6HCQ|1|51|G|1453

Current chains

Chain 51

28S ribosomal RNA

Nearby chains

Chain C3

uL4

Chain F3

uL30

Chain Q3

eL18

Chain b3

eL29