HL_6HCQ_026

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

GACGUGCGAAUC

Length

12 nucleotides

Bulged bases

6HCQ|1|51|U|1596, 6HCQ|1|51|A|1600, 6HCQ|1|51|A|1601

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|51|G|1592
6HCQ|1|51|A|1593
6HCQ|1|51|C|1594
6HCQ|1|51|G|1595
6HCQ|1|51|U|1596
6HCQ|1|51|G|1597
6HCQ|1|51|C|1598
6HCQ|1|51|G|1599
6HCQ|1|51|A|1600
6HCQ|1|51|A|1601
6HCQ|1|51|U|1602
6HCQ|1|51|C|1603

Current chains

Chain 51

28S ribosomal RNA

Nearby chains

Chain 1

nascent chain

Chain B3

uL3

Chain P3

uL22

Chain j3

Ribosomal protein L37