HL_6HCQ_040

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

GGGUUCAGAUCCCC

Length

14 nucleotides

Bulged bases

6HCQ|1|51|U|2530

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|51|G|2521
6HCQ|1|51|G|2522
6HCQ|1|51|G|2523
6HCQ|1|51|U|2524
6HCQ|1|51|U|2525
6HCQ|1|51|C|2526
6HCQ|1|51|A|2527
6HCQ|1|51|G|2528
6HCQ|1|51|A|2529
6HCQ|1|51|U|2530
6HCQ|1|51|C|2531
6HCQ|1|51|C|2532
6HCQ|1|51|C|2533
6HCQ|1|51|C|2534

Current chains

Chain 51

28S ribosomal RNA

Nearby chains

Chain R3

eL19

Chain X3

uL23

Chain g3

eL34

Chain k3

eL38