HL_6HCQ_095

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

GUCCACUUUAAAUCCUUUAAC

Length

21 nucleotides

Bulged bases

6HCQ|1|A2|U|573

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|A2|G|565
6HCQ|1|A2|U|566
6HCQ|1|A2|C|567
6HCQ|1|A2|C|568
6HCQ|1|A2|A|569
6HCQ|1|A2|C|570
6HCQ|1|A2|U|571
6HCQ|1|A2|U|572
6HCQ|1|A2|U|573
6HCQ|1|A2|A|574
6HCQ|1|A2|A|575
6HCQ|1|A2|A|576
6HCQ|1|A2|U|577
6HCQ|1|A2|C|578
6HCQ|1|A2|C|579
6HCQ|1|A2|U|580
6HCQ|1|A2|U|581
6HCQ|1|A2|U|582
6HCQ|1|A2|A|583
6HCQ|1|A2|A|584
6HCQ|1|A2|C|585

Current chains

Chain A2

18S ribosomal RNA

Nearby chains

Chain K2

Ribosomal protein S9 (Predicted)

Chain Z2

eS24