HL_6HCQ_113

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

GGGUCAUAAGCUU

Length

13 nucleotides

Bulged bases

6HCQ|1|A2|G|1665

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|A2|G|1656
6HCQ|1|A2|G|1657
6HCQ|1|A2|G|1658
6HCQ|1|A2|U|1659
6HCQ|1|A2|C|1660
6HCQ|1|A2|A|1661
6HCQ|1|A2|U|1662
6HCQ|1|A2|A|1663
6HCQ|1|A2|A|1664
6HCQ|1|A2|G|1665
6HCQ|1|A2|C|1666
6HCQ|1|A2|U|1667
6HCQ|1|A2|U|1668

Current chains

Chain A2

18S ribosomal RNA

Nearby chains

Chain R2

Ribosomal protein S16

Chain U2

eS19

Chain V2

uS10

Chain e2

uS14