HL_6HCQ_129
3D structure
- PDB id
- 6HCQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit collided di-ribosome (collided monosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.5 Å
Loop
- Sequence
- AUGCCUGGGCAGGGCGAAGCCAGAGGAAACUCUGGUGGAGGUCCGUAGCGGUCCUGACGUGCGAAUCGGUCGUCCGACCUGGGUAU
- Length
- 86 nucleotides
- Bulged bases
- 6HCQ|1|51|A|1563, 6HCQ|1|51|G|1571, 6HCQ|1|51|U|1572, 6HCQ|1|51|G|1577, 6HCQ|1|51|U|1591, 6HCQ|1|51|U|1596, 6HCQ|1|51|A|1600, 6HCQ|1|51|A|1601, 6HCQ|1|51|A|1613
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HCQ|1|51|A|1537
6HCQ|1|51|U|1538
6HCQ|1|51|G|1539
6HCQ|1|51|C|1540
6HCQ|1|51|C|1541
6HCQ|1|51|U|1542
6HCQ|1|51|G|1543
6HCQ|1|51|G|1544
6HCQ|1|51|G|1545
6HCQ|1|51|C|1546
6HCQ|1|51|A|1547
6HCQ|1|51|G|1548
6HCQ|1|51|G|1549
6HCQ|1|51|G|1550
6HCQ|1|51|C|1551
6HCQ|1|51|G|1552
6HCQ|1|51|A|1553
6HCQ|1|51|A|1554
6HCQ|1|51|G|1555
6HCQ|1|51|C|1556
6HCQ|1|51|C|1557
6HCQ|1|51|A|1558
6HCQ|1|51|G|1559
6HCQ|1|51|A|1560
6HCQ|1|51|G|1561
6HCQ|1|51|G|1562
6HCQ|1|51|A|1563
6HCQ|1|51|A|1564
6HCQ|1|51|A|1565
6HCQ|1|51|C|1566
6HCQ|1|51|U|1567
6HCQ|1|51|C|1568
6HCQ|1|51|U|1569
6HCQ|1|51|G|1570
6HCQ|1|51|G|1571
6HCQ|1|51|U|1572
6HCQ|1|51|G|1573
6HCQ|1|51|G|1574
6HCQ|1|51|A|1575
6HCQ|1|51|G|1576
6HCQ|1|51|G|1577
6HCQ|1|51|U|1578
6HCQ|1|51|C|1579
6HCQ|1|51|C|1580
6HCQ|1|51|G|1581
6HCQ|1|51|U|1582
6HCQ|1|51|A|1583
6HCQ|1|51|G|1584
6HCQ|1|51|C|1585
6HCQ|1|51|G|1586
6HCQ|1|51|G|1587
6HCQ|1|51|U|1588
6HCQ|1|51|C|1589
6HCQ|1|51|C|1590
6HCQ|1|51|U|1591
6HCQ|1|51|G|1592
6HCQ|1|51|A|1593
6HCQ|1|51|C|1594
6HCQ|1|51|G|1595
6HCQ|1|51|U|1596
6HCQ|1|51|G|1597
6HCQ|1|51|C|1598
6HCQ|1|51|G|1599
6HCQ|1|51|A|1600
6HCQ|1|51|A|1601
6HCQ|1|51|U|1602
6HCQ|1|51|C|1603
6HCQ|1|51|G|1604
6HCQ|1|51|G|1605
6HCQ|1|51|U|1606
6HCQ|1|51|C|1607
6HCQ|1|51|G|1608
6HCQ|1|51|U|1609
6HCQ|1|51|C|1610
6HCQ|1|51|C|1611
6HCQ|1|51|G|1612
6HCQ|1|51|A|1613
6HCQ|1|51|C|1614
6HCQ|1|51|C|1615
6HCQ|1|51|U|1616
6HCQ|1|51|G|1617
6HCQ|1|51|G|1618
6HCQ|1|51|G|1619
6HCQ|1|51|U|1620
6HCQ|1|51|A|1621
6HCQ|1|51|U|1622
Current chains
- Chain 51
- 28S ribosomal RNA
Nearby chains
- Chain 1
- nascent chain
- Chain A2
- Small subunit ribosomal RNA; SSU rRNA
- Chain A3
- Ribosomal protein L8
- Chain B3
- uL3
- Chain M2
- Ribosomal protein S11
- Chain O2
- uS15
- Chain P3
- uL22
- Chain R3
- eL19
- Chain g3
- eL34
- Chain j3
- Ribosomal protein L37
- Chain p3
- eL43
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