HL_6HCQ_134

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

CCGUAACUUCGGGAUAAGG

Length

19 nucleotides

Bulged bases

6HCQ|1|51|U|2874, 6HCQ|1|51|U|2880

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|51|C|2866
6HCQ|1|51|C|2867
6HCQ|1|51|G|2868
6HCQ|1|51|U|2869
6HCQ|1|51|A|2870
6HCQ|1|51|A|2871
6HCQ|1|51|C|2872
6HCQ|1|51|U|2873
6HCQ|1|51|U|2874
6HCQ|1|51|C|2875
6HCQ|1|51|G|2876
6HCQ|1|51|G|2877
6HCQ|1|51|G|2878
6HCQ|1|51|A|2879
6HCQ|1|51|U|2880
6HCQ|1|51|A|2881
6HCQ|1|51|A|2882
6HCQ|1|51|G|2883
6HCQ|1|51|G|2884

Current chains

Chain 51

28S ribosomal RNA

Nearby chains

Chain A2

Small subunit ribosomal RNA; SSU rRNA

Chain R3

eL19

Chain n3

eL41

Chain p3

eL43