HL_6HCQ_139

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

CCAAGCGUUCAUAGCGACG

Length

19 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|51|C|4412
6HCQ|1|51|C|4413
6HCQ|1|51|A|4414
6HCQ|1|51|A|4415
6HCQ|1|51|G|4416
6HCQ|1|51|C|4417
6HCQ|1|51|G|4418
6HCQ|1|51|U|4419
6HCQ|1|51|U|4420
6HCQ|1|51|C|4421
6HCQ|1|51|A|4422
6HCQ|1|51|U|4423
6HCQ|1|51|A|4424
6HCQ|1|51|G|4425
6HCQ|1|51|C|4426
6HCQ|1|51|G|4427
6HCQ|1|51|A|4428
6HCQ|1|51|C|4429
6HCQ|1|51|G|4430

Current chains

Chain 51

28S ribosomal RNA

Nearby chains

Chain I3

60S ribosomal protein L10

Chain m3

eL40