HL_6HCQ_167

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

ACUUUUGGUAAGCAGAACU

Length

19 nucleotides

Bulged bases

6HCQ|1|51|G|1869

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|51|A|1858
6HCQ|1|51|C|1859
6HCQ|1|51|U|1860
6HCQ|1|51|U|1861
6HCQ|1|51|U|1862
6HCQ|1|51|U|1863
6HCQ|1|51|G|1864
6HCQ|1|51|G|1865
6HCQ|1|51|U|1866
6HCQ|1|51|A|1867
6HCQ|1|51|A|1868
6HCQ|1|51|G|1869
6HCQ|1|51|C|1870
6HCQ|1|51|A|1871
6HCQ|1|51|G|1872
6HCQ|1|51|A|1873
6HCQ|1|51|A|1874
6HCQ|1|51|C|1875
6HCQ|1|51|U|1876

Current chains

Chain 51

28S ribosomal RNA

Nearby chains

Chain 71

5S ribosomal RNA; 5S rRNA

Chain F3

uL30

Chain I3

60S ribosomal protein L10

Chain b3

eL29