3D structure

PDB id
6HD7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the ribosome-NatA complex
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
GUGUAACAAC
Length
10 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6HD7|1|1|G|1266
6HD7|1|1|U|1267
6HD7|1|1|G|1268
6HD7|1|1|U|1269
6HD7|1|1|A|1270
6HD7|1|1|A|1271
6HD7|1|1|C|1272
6HD7|1|1|A|1273
6HD7|1|1|A|1274
6HD7|1|1|C|1275

Current chains

Chain 1
Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA

Nearby chains

No other chains within 10Å

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1095 s