HL_6HMA_005

3D structure

PDB id

6HMA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Improved model derived from cryo-EM map of Staphylococcus aureus large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

UGAAUACAUAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HMA|1|A|U|159
6HMA|1|A|G|160
6HMA|1|A|A|161
6HMA|1|A|A|162
6HMA|1|A|U|163
6HMA|1|A|A|164
6HMA|1|A|C|165
6HMA|1|A|A|166
6HMA|1|A|U|167
6HMA|1|A|A|168
6HMA|1|A|G|169

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain V

50S ribosomal protein L28