HL_6HMA_036

3D structure

PDB id

6HMA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Improved model derived from cryo-EM map of Staphylococcus aureus large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

GUGCGAUUGGAUUGC

Length

15 nucleotides

Bulged bases

6HMA|1|A|A|1497, 6HMA|1|A|U|1503

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HMA|1|A|G|1492
6HMA|1|A|U|1493
6HMA|1|A|G|1494
6HMA|1|A|C|1495
6HMA|1|A|G|1496
6HMA|1|A|A|1497
6HMA|1|A|U|1498
6HMA|1|A|U|1499
6HMA|1|A|G|1500
6HMA|1|A|G|1501
6HMA|1|A|A|1502
6HMA|1|A|U|1503
6HMA|1|A|U|1504
6HMA|1|A|G|1505
6HMA|1|A|C|1506

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain L

50S ribosomal protein L17