HL_6HMA_045

3D structure

PDB id

6HMA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Improved model derived from cryo-EM map of Staphylococcus aureus large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

UUAGCUUCUGCGAAG

Length

15 nucleotides

Bulged bases

6HMA|1|A|C|1898, 6HMA|1|A|C|1901

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HMA|1|A|U|1891
6HMA|1|A|U|1892
6HMA|1|A|A|1893
6HMA|1|A|G|1894
6HMA|1|A|C|1895
6HMA|1|A|U|1896
6HMA|1|A|U|1897
6HMA|1|A|C|1898
6HMA|1|A|U|1899
6HMA|1|A|G|1900
6HMA|1|A|C|1901
6HMA|1|A|G|1902
6HMA|1|A|A|1903
6HMA|1|A|A|1904
6HMA|1|A|G|1905

Current chains

Chain A

23S ribosomal RNA

Nearby chains