HL_6HMA_049

3D structure

PDB id

6HMA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Improved model derived from cryo-EM map of Staphylococcus aureus large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

AGCGCUAGCU

Length

10 nucleotides

Bulged bases

6HMA|1|A|C|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HMA|1|A|A|2168
6HMA|1|A|G|2169
6HMA|1|A|C|2170
6HMA|1|A|G|2171
6HMA|1|A|C|2172
6HMA|1|A|U|2173
6HMA|1|A|A|2174
6HMA|1|A|G|2175
6HMA|1|A|C|2176
6HMA|1|A|U|2177

Current chains

Chain A

23S ribosomal RNA

Nearby chains