HL_6HRM_081
3D structure
- PDB id
- 6HRM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S d2d8 stapled ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.96 Å
Loop
- Sequence
- GUG(6MZ)AGAUGC
- Length
- 10 nucleotides
- Bulged bases
- 6HRM|1|1|A|3537, 6HRM|1|1|G|3538
- QA status
- Modified nucleotides: 6MZ
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6HRM_081 not in the Motif Atlas
- Geometric match to HL_4WF9_047
- Geometric discrepancy: 0.1086
- The information below is about HL_4WF9_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_61996.3
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
6HRM|1|1|G|3533
6HRM|1|1|U|3534
6HRM|1|1|G|3535
6HRM|1|1|6MZ|3536
6HRM|1|1|A|3537
6HRM|1|1|G|3538
6HRM|1|1|A|3539
6HRM|1|1|U|3540
6HRM|1|1|G|3541
6HRM|1|1|C|3542
Current chains
- Chain 1
- stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA
Nearby chains
- Chain C
- 50S ribosomal protein L3
- Chain R
- 50S ribosomal protein L21
- Chain b
- 50S ribosomal protein L32
Coloring options: