HL_6HRM_086
3D structure
- PDB id
- 6HRM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S d2d8 stapled ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.96 Å
Loop
- Sequence
- GGUCGGACAUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6HRM_086 not in the Motif Atlas
- Geometric match to HL_7RQB_055
- Geometric discrepancy: 0.169
- The information below is about HL_7RQB_055
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_11805.3
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
6HRM|1|1|G|3809
6HRM|1|1|G|3810
6HRM|1|1|U|3811
6HRM|1|1|C|3812
6HRM|1|1|G|3813
6HRM|1|1|G|3814
6HRM|1|1|A|3815
6HRM|1|1|C|3816
6HRM|1|1|A|3817
6HRM|1|1|U|3818
6HRM|1|1|C|3819
Current chains
- Chain 1
- stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA
Nearby chains
- Chain E
- 50S ribosomal protein L5
Coloring options: