3D structure

PDB id
6HRM (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S d2d8 stapled ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.96 Å

Loop

Sequence
GAAGGGAGUAAAGUUAAUACCUUUGCUCAUUGAC
Length
34 nucleotides
Bulged bases
6HRM|1|1|U|467
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6HRM|1|1|G|450
6HRM|1|1|A|451
6HRM|1|1|A|452
6HRM|1|1|G|453
6HRM|1|1|G|454
6HRM|1|1|G|455
6HRM|1|1|A|456
6HRM|1|1|G|457
6HRM|1|1|U|458
6HRM|1|1|A|459
6HRM|1|1|A|460
6HRM|1|1|A|461
6HRM|1|1|G|462
6HRM|1|1|U|463
6HRM|1|1|U|464
6HRM|1|1|A|465
6HRM|1|1|A|466
6HRM|1|1|U|467
6HRM|1|1|A|468
6HRM|1|1|C|469
6HRM|1|1|C|470
6HRM|1|1|U|471
6HRM|1|1|U|472
6HRM|1|1|U|473
6HRM|1|1|G|474
6HRM|1|1|C|475
6HRM|1|1|U|476
6HRM|1|1|C|477
6HRM|1|1|A|478
6HRM|1|1|U|479
6HRM|1|1|U|480
6HRM|1|1|G|481
6HRM|1|1|A|482
6HRM|1|1|C|483

Current chains

Chain 1
stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA

Nearby chains

Chain u
30S ribosomal protein S16

Coloring options:

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