3D structure

PDB id
6HRM (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S d2d8 stapled ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.96 Å

Loop

Sequence
GGCAAGGGGGUCAUCCCGACUUACCAACCC
Length
30 nucleotides
Bulged bases
6HRM|1|1|C|2396, 6HRM|1|1|A|2402
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6HRM|1|1|G|2380
6HRM|1|1|G|2381
6HRM|1|1|C|2382
6HRM|1|1|A|2383
6HRM|1|1|A|2384
6HRM|1|1|G|2385
6HRM|1|1|G|2386
6HRM|1|1|G|2387
6HRM|1|1|G|2388
6HRM|1|1|G|2389
6HRM|1|1|U|2390
6HRM|1|1|C|2391
6HRM|1|1|A|2392
6HRM|1|1|U|2393
6HRM|1|1|C|2394
6HRM|1|1|C|2395
6HRM|1|1|C|2396
6HRM|1|1|G|2397
6HRM|1|1|A|2398
6HRM|1|1|C|2399
6HRM|1|1|U|2400
6HRM|1|1|U|2401
6HRM|1|1|A|2402
6HRM|1|1|C|2403
6HRM|1|1|C|2404
6HRM|1|1|A|2405
6HRM|1|1|A|2406
6HRM|1|1|C|2407
6HRM|1|1|C|2408
6HRM|1|1|C|2409

Current chains

Chain 1
stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA

Nearby chains

Chain M
50S ribosomal protein L16
Chain r
30S ribosomal protein S13

Coloring options:

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