HL_6HRM_117

3D structure

PDB id

6HRM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S d2d8 stapled ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.96 Å

Loop

Sequence

GACGCUUAUGCGUU

Length

14 nucleotides

Bulged bases

6HRM|1|1|U|2679, 6HRM|1|1|U|2680, 6HRM|1|1|A|2681, 6HRM|1|1|U|2682

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HRM|1|1|G|2674
6HRM|1|1|A|2675
6HRM|1|1|C|2676
6HRM|1|1|G|2677
6HRM|1|1|C|2678
6HRM|1|1|U|2679
6HRM|1|1|U|2680
6HRM|1|1|A|2681
6HRM|1|1|U|2682
6HRM|1|1|G|2683
6HRM|1|1|C|2684
6HRM|1|1|G|2685
6HRM|1|1|U|2686
6HRM|1|1|U|2687

Current chains

Chain 1

stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA

Nearby chains