HL_6HTQ_025

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

CCUACCG

Length

7 nucleotides

Bulged bases

6HTQ|1|A|C|936

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6HTQ_025 not in the Motif Atlas

Geometric match to HL_7KI3_001

Geometric discrepancy: 0.2389

The information below is about HL_7KI3_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.8

Basepair signature

cWW-F

Number of instances in this motif group

23

Unit IDs

6HTQ|1|A|C|932
6HTQ|1|A|C|933
6HTQ|1|A|U|934
6HTQ|1|A|A|935
6HTQ|1|A|C|936
6HTQ|1|A|C|937
6HTQ|1|A|G|938

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain m

30S ribosomal protein S13

Chain v

Transfer RNA; tRNA

Chain x

GTP pyrophosphokinase