HL_6HTQ_030

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

CGGAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6HTQ_030 not in the Motif Atlas

Homologous match to HL_7A0S_031

Geometric discrepancy: 0.254

The information below is about HL_7A0S_031

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

6HTQ|1|A|C|1262
6HTQ|1|A|G|1263
6HTQ|1|A|G|1264
6HTQ|1|A|A|1265
6HTQ|1|A|A|1266
6HTQ|1|A|G|1267

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain Q

50S ribosomal protein L20

Chain R

50S ribosomal protein L21