HL_6HTQ_058

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

CGCAUGGAAG

Length

10 nucleotides

Bulged bases

6HTQ|1|A|C|2435

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6HTQ_058 not in the Motif Atlas

Homologous match to HL_7RQB_059

Geometric discrepancy: 0.2069

The information below is about HL_7RQB_059

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40210.2

Basepair signature

cWW-tSH-F

Number of instances in this motif group

12

Unit IDs

6HTQ|1|A|C|2433
6HTQ|1|A|G|2434
6HTQ|1|A|C|2435
6HTQ|1|A|A|2436
6HTQ|1|A|U|2437
6HTQ|1|A|G|2438
6HTQ|1|A|G|2439
6HTQ|1|A|A|2440
6HTQ|1|A|A|2441
6HTQ|1|A|G|2442

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain L

50S ribosomal protein L15