HL_6HTQ_079

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

6HTQ|1|a|A|352

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6HTQ_079 not in the Motif Atlas

Homologous match to HL_5J7L_009

Geometric discrepancy: 0.1883

The information below is about HL_5J7L_009

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

6HTQ|1|a|C|350
6HTQ|1|a|U|351
6HTQ|1|a|A|352
6HTQ|1|a|C|353
6HTQ|1|a|G|354
6HTQ|1|a|G|355

Current chains

Chain a

16S rRNA

Nearby chains

Chain K

50S ribosomal protein L14

Chain P

50S ribosomal protein L19

Chain x

GTP pyrophosphokinase