HL_6HTQ_086

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

CGAAGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6HTQ_086 not in the Motif Atlas

Homologous match to HL_4LFB_016

Geometric discrepancy: 0.1656

The information below is about HL_4LFB_016

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

6HTQ|1|a|C|735
6HTQ|1|a|G|736
6HTQ|1|a|A|737
6HTQ|1|a|A|738
6HTQ|1|a|G|739
6HTQ|1|a|G|740

Current chains

Chain a

16S rRNA

Nearby chains

Chain o

30S ribosomal protein S15

Chain r

30S ribosomal protein S18