HL_6HTQ_093

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

6HTQ|1|a|U|1040

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6HTQ_093 not in the Motif Atlas

Geometric match to HL_1P6V_001

Geometric discrepancy: 0.2647

The information below is about HL_1P6V_001

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_53890.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

15

Unit IDs

6HTQ|1|a|C|1038
6HTQ|1|a|U|1039
6HTQ|1|a|U|1040
6HTQ|1|a|C|1041
6HTQ|1|a|G|1042
6HTQ|1|a|G|1043

Current chains

Chain a

16S rRNA

Nearby chains