HL_6HTQ_094

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

GUCGUGAGAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6HTQ_094 not in the Motif Atlas

Geometric match to HL_8KAL_008

Geometric discrepancy: 0.3557

The information below is about HL_8KAL_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

6HTQ|1|a|G|1084
6HTQ|1|a|U|1085
6HTQ|1|a|C|1086
6HTQ|1|a|G|1087
6HTQ|1|a|U|1088
6HTQ|1|a|G|1089
6HTQ|1|a|A|1090
6HTQ|1|a|G|1091
6HTQ|1|a|A|1092
6HTQ|1|a|U|1093

Current chains

Chain a

16S rRNA

Nearby chains

Chain b

30S ribosomal protein S2

Chain e

30S ribosomal protein S5