HL_6HTQ_097

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

UGACAAA

Length

7 nucleotides

Bulged bases

6HTQ|1|a|C|1177

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6HTQ_097 not in the Motif Atlas

Homologous match to HL_5J7L_026

Geometric discrepancy: 0.412

The information below is about HL_5J7L_026

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_93535.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

6

Unit IDs

6HTQ|1|a|U|1174
6HTQ|1|a|G|1175
6HTQ|1|a|A|1176
6HTQ|1|a|C|1177
6HTQ|1|a|A|1178
6HTQ|1|a|A|1179
6HTQ|1|a|A|1180

Current chains

Chain a

16S rRNA

Nearby chains

Chain b

30S ribosomal protein S2