HL_6HTQ_103
3D structure
- PDB id
- 6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- UCAGUUGGUAGA
- Length
- 12 nucleotides
- Bulged bases
- 6HTQ|1|u|U|16, 6HTQ|1|u|U|17, 6HTQ|1|u|U|20
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6HTQ_103 not in the Motif Atlas
- Homologous match to HL_1SER_001
- Geometric discrepancy: 0.4508
- The information below is about HL_1SER_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_40252.3
- Basepair signature
- cWW-tSH-cWS-F
- Number of instances in this motif group
- 5
Unit IDs
6HTQ|1|u|U|12
6HTQ|1|u|C|13
6HTQ|1|u|A|14
6HTQ|1|u|G|15
6HTQ|1|u|U|16
6HTQ|1|u|U|17
6HTQ|1|u|G|18
6HTQ|1|u|G|19
6HTQ|1|u|U|20
6HTQ|1|u|A|21
6HTQ|1|u|G|22
6HTQ|1|u|A|23
Current chains
- Chain u
- A/R-tRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain l
- 30S ribosomal protein S12
- Chain x
- GTP pyrophosphokinase
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