HL_6HTQ_109
3D structure
- PDB id
- 6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- GUUCAAGUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6HTQ_109 not in the Motif Atlas
- Homologous match to HL_2BTE_004
- Geometric discrepancy: 0.2673
- The information below is about HL_2BTE_004
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_28252.9
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 141
Unit IDs
6HTQ|1|v|G|64
6HTQ|1|v|U|65
6HTQ|1|v|U|66
6HTQ|1|v|C|67
6HTQ|1|v|A|68
6HTQ|1|v|A|69
6HTQ|1|v|G|70
6HTQ|1|v|U|71
6HTQ|1|v|C|72
Current chains
- Chain v
- P-tRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain F
- 50S ribosomal protein L5
- Chain M
- 50S ribosomal protein L16
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